Details of Microbe Species (MIC)

General Information of MIC (ID: MIC00024)
MIC Name Acinetobacter sp. (gamma-proteobacteria)
Body Site Skin
Lineage Kingdom: Bacteria
Phylum: Proteobacteria
Class: Gammaproteobacteria
Order: Pseudomonadales
Family: Moraxellaceae
Genus: Acinetobacter
Species: Acinetobacter sp.
Oxygen Sensitivity Aerobe
Microbial Metabolism Nonactose fermenting; Nonfastidious; Nonmotile; Catalase positive; and Oxidase negative
Gram Negative
Host Relationship Opportunistic pathogen
Description Acinetobacter is a genus of Gram-negative bacteria belonging to the wider class of Gammaproteobacteria. Acinetobacter species are oxidase-negative, exhibit twitching motility, and occur in pairs under magnification.
External Links Taxonomy ID
472
GOLD Organism ID
Go0004667
Host Genetic Factors (HGFs)
          hsa-miR-106b-5p
             HGF ID HGF0287 HGF Info       Class Non-coding RNA: Micro (ncRNA-miRNA)
             Description Biofilm featuring presence of Acenitobacter demonstrated additive effect in inducing miR-106b. [1]
          rs9288646
             HGF ID HGF2127 HGF Info       Class Single Nucleotide Polymorphism (SNP)
             Description The rs9288646 SNP was significantly associated with the abundance of Acinetobacter (p-value=3.90E-06). [2]
          rs7563766
             HGF ID HGF2129 HGF Info       Class Single Nucleotide Polymorphism (SNP)
             Description The rs7563766 SNP was significantly associated with the abundance of Acinetobacter (p-value=1.31E-06). [2]
          rs6717477
             HGF ID HGF2128 HGF Info       Class Single Nucleotide Polymorphism (SNP)
             Description The rs6717477 SNP was significantly associated with the abundance of Acinetobacter (p-value=1.31E-06). [2]
          rs6534322
             HGF ID HGF2076 HGF Info       Class Single Nucleotide Polymorphism (SNP)
             Description The rs6534322 SNP was significantly associated with the relative abundance of Acinetobacter (p-value=3.47E-09). [3]
          rs4662863
             HGF ID HGF2140 HGF Info       Class Single Nucleotide Polymorphism (SNP)
             Description The rs4662863 SNP was significantly associated with the abundance of Acinetobacter (p-value=9.48E-08). [2]
Environmental Factor(s)
             Disbiome ID
      317
             gutMDisorder ID
      gm0012
             aBiofilm Organism
      Acinetobacter sp.
References
1 Altered Fecal Small RNA Profiles in Colorectal Cancer Reflect Gut Microbiome Composition in Stool Samples. Tarallo S, Ferrero G, Gallo G, Francavilla A, Clerico G, Realis Luc A, Manghi P, Thomas AM, Vineis P, Segata N, Pardini B, Naccarati A, Cordero F.. mSystems. 2019 Sep 17;4(5):e00289-19. doi: 10.1128/mSystems.00289-19.
2 Genome-Wide Association Studies of the Human Gut Microbiota.PLoS One. 2015 Nov 3;10(11):e0140301. doi: 10.1371/journal.pone.0140301. eCollection 2015.
3 Association of host genome with intestinal microbial composition in a large healthy cohort.Nat Genet. 2016 Nov;48(11):1413-1417. doi: 10.1038/ng.3693. Epub 2016 Oct 3.

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