General Information of MIC (ID: MIC00755)
MIC Name Lentisphaerae (bacteria)
MIC Synonyms Lentisphaeraeota; Lentisphaerota
Body Site Gut
Lineage Kingdom: Bacteria
Phylum: Lentisphaerae
Oxygen Sensitivity Aerobe or Anaerobe
Microbial Metabolism Fermentative
Gram Negative
Host Relationship Commensal
Description Lentisphaerae is a phylum of Gram negative bacteria closely related to Chlamydiae and Verrucomicrobia.
External Links Taxonomy ID
256845
Disease Relevance
          Juvenile idiopathic arthritis  [ICD-11: FA24]
             Description Lentisphaerae was associated with juvenile idiopathic arthritis. [1]
          Post traumatic stress disorder  [ICD-11: 6B40]
             Description Decreased total abundance of Actinobacteria, Lentisphaerae, and Verrucomicrobia was associated with PTSD status. [2]
Host Genetic Factors (HGFs)
          rs9541094
             HGF ID HGF2215 HGF Info       Class Single Nucleotide Polymorphism (SNP)
             Description The rs9541094 SNP was significantly associated with the relative abundance of Lentisphaerae (p-value=3.07E-08). [3]
          rs74997447
             HGF ID HGF1933 HGF Info       Class Single Nucleotide Polymorphism: Intron variant (SNP-IV)
             Description The rs74997447 SNP was significantly associated with the relative abundance of Lentisphaerae (p-value=4.68E-09). [3]
          rs516246
             HGF ID HGF1582 HGF Info       Class Single Nucleotide Polymorphism: Non coding transcript variant (SNP-NCTV)
             Description The rs516246 SNP was significantly associated with the abundance of Lentisphaerae (p-value=0.0266). [4]
          rs1800694
             HGF ID HGF1761 HGF Info       Class Single Nucleotide Polymorphism: Intron variant (SNP-IV)
             Description The rs1800694 SNP was significantly associated with the relative abundance of Lentisphaerae (p-value=5.93E-08). [3]
          rs111870934
             HGF ID HGF1554 HGF Info       Class Single Nucleotide Polymorphism: Intron variant (SNP-IV)
             Description The rs111870934 SNP was significantly associated with the relative abundance of Lentisphaerae (p-value=5.32E-11). [3]
Environmental Factor(s)
             gutMDisorder ID
      gm0420
References
1 Faecal microbiome in new-onset juvenile idiopathic arthritis. Eur J Clin Microbiol Infect Dis. 2016 Mar;35(3):363-70. doi: 10.1007/s10096-015-2548-x. Epub 2015 Dec 30.
2 The Microbiome in Posttraumatic Stress Disorder and Trauma-Exposed Controls: An Exploratory Study. Psychosom Med. 2017 Oct;79(8):936-946. doi: 10.1097/PSY.0000000000000512.
3 Association of host genome with intestinal microbial composition in a large healthy cohort.Nat Genet. 2016 Nov;48(11):1413-1417. doi: 10.1038/ng.3693. Epub 2016 Oct 3.
4 FUT2 genotype and secretory status are not associated with fecal microbial composition and inferred function in healthy subjects.Gut Microbes. 2018 Jul 4;9(4):357-368. doi: 10.1080/19490976.2018.1445956. Epub 2018 Apr 27.

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