Details of Microbe Species (MIC)

General Information of MIC (ID: MIC01060)
MIC Name Pseudomonas oleovorans (gamma-proteobacteria)
MIC Synonyms Pseudomonas pseudoalcaligenes
Body Site Blood
Lineage Kingdom: Bacteria
Phylum: Proteobacteria
Class: Gammaproteobacteria
Order: Pseudomonadales
Family: Pseudomonadaceae
Genus: Pseudomonas
Species: Pseudomonas oleovorans
Oxygen Sensitivity Aerobe
Microbial Metabolism Saccharolytic
Gram Negative
Genome Size (bp) 4696984
No. of Coding Genes 4432
No. of Non-Coding Genes 79
No. of Small Non-Coding Genes 79
No. of Gene Transcripts 4511
No. of Base Pairs 4696984
Description Pseudomonas oleovorans is a Gram-negative, methylotrophic bacterium that is a source of rubredoxin
External Links Taxonomy ID
301
Genome Assembly ID
Ppseudo_Pac
GOLD Organism ID
Go0012839
Host Genetic Factors (HGFs)
          RNA77
             HGF ID HGF1110 HGF Info       Class Non-coding RNA: Small (ncRNA-sRNA)
             Description The level of RNA77 expression was significantly associated with Pseudomonas pseudoalcaligenes CECT5344 (p-value<0.05). [1]
          RNA683
             HGF ID HGF1109 HGF Info       Class Non-coding RNA: Small (ncRNA-sRNA)
             Description The level of RNA683 expression was significantly associated with Pseudomonas pseudoalcaligenes CECT5344 (p-value<0.05). [1]
          RNA679
             HGF ID HGF1108 HGF Info       Class Non-coding RNA: Small (ncRNA-sRNA)
             Description The level of RNA679 expression was significantly associated with Pseudomonas pseudoalcaligenes CECT5344 (p-value<0.05). [1]
          RNA676
             HGF ID HGF1107 HGF Info       Class Non-coding RNA: Small (ncRNA-sRNA)
             Description The level of RNA676 expression was significantly associated with Pseudomonas pseudoalcaligenes CECT5344 (p-value<0.05). [1]
          RNA675
             HGF ID HGF1106 HGF Info       Class Non-coding RNA: Small (ncRNA-sRNA)
             Description The level of RNA675 expression was significantly associated with Pseudomonas pseudoalcaligenes CECT5344 (p-value<0.05). [1]
          RNA655
             HGF ID HGF1105 HGF Info       Class Non-coding RNA: Small (ncRNA-sRNA)
             Description The expression of sRNA655 was poorly distributed of Pseudomonas pseudoalcaligenes CECT5344. [1]
          RNA649
             HGF ID HGF1104 HGF Info       Class Non-coding RNA: Small (ncRNA-sRNA)
             Description A target of sRNA649 was the regulatory protein GntR-like protein of Pseudomonas pseudoalcaligenes CECT5344. [1]
          RNA601
             HGF ID HGF1103 HGF Info       Class Non-coding RNA: Small (ncRNA-sRNA)
             Description The level of RNA601 expression was significantly associated with Pseudomonas pseudoalcaligenes CECT5344 (p-value<0.05). [1]
          RNA559
             HGF ID HGF1101 HGF Info       Class Non-coding RNA: Small (ncRNA-sRNA)
             Description The level of RNA559 expression was significantly associated with Pseudomonas pseudoalcaligenes CECT5344 (p-value<0.05). [1]
          RNA511
             HGF ID HGF1100 HGF Info       Class Non-coding RNA: Small (ncRNA-sRNA)
             Description The sRNAA511 showed a reduced number of specific targets that were found affected by the jewelry residue in previous omic studies in the Pseudomonas pseudoalcaligenes CECT5344. [1]
          RNA502
             HGF ID HGF1099 HGF Info       Class Non-coding RNA: Small (ncRNA-sRNA)
             Description The level of RNA502 expression was significantly associated with Pseudomonas pseudoalcaligenes CECT5344 (p-value<0.05). [1]
          RNA455
             HGF ID HGF1098 HGF Info       Class Non-coding RNA: Small (ncRNA-sRNA)
             Description The expression of sRNA455 was poorly distributed of Pseudomonas pseudoalcaligenes CECT5344. [1]
          RNA431
             HGF ID HGF1097 HGF Info       Class Non-coding RNA: Small (ncRNA-sRNA)
             Description The level of RNA431 expression was significantly associated with Pseudomonas pseudoalcaligenes CECT5344 (p-value<0.05). [1]
          RNA312
             HGF ID HGF1096 HGF Info       Class Non-coding RNA: Small (ncRNA-sRNA)
             Description The level of RNA312 expression was significantly associated with Pseudomonas pseudoalcaligenes CECT5344 (p-value<0.05). [1]
          RNA258
             HGF ID HGF1095 HGF Info       Class Non-coding RNA: Small (ncRNA-sRNA)
             Description The expression of sRNA258 was widely distributed of Pseudomonas pseudoalcaligenes CECT5344. [1]
          RNA222
             HGF ID HGF1094 HGF Info       Class Non-coding RNA: Small (ncRNA-sRNA)
             Description The sRNA222, one of Pseudomonas pseudoalcaligenes CECT5344 sRNA candidates, was exclusively found in Pseudomonas. [1]
          RNA184
             HGF ID HGF1093 HGF Info       Class Non-coding RNA: Small (ncRNA-sRNA)
             Description The expression of sRNA184 was widely distributed of Pseudomonas pseudoalcaligenes CECT5344. [1]
          RNA150
             HGF ID HGF1092 HGF Info       Class Non-coding RNA: Small (ncRNA-sRNA)
             Description The sRNA150 showed a reduced number of specific targets that were found affected by the jewelry residue in previous omic studies in the Pseudomonas pseudoalcaligenes CECT5344. [1]
          RNA149
             HGF ID HGF1091 HGF Info       Class Non-coding RNA: Small (ncRNA-sRNA)
             Description The sRNA149, one of Pseudomonas pseudoalcaligenes CECT5344 sRNA candidates, was exclusively found in Pseudomonas. [1]
          RNA14
             HGF ID HGF1090 HGF Info       Class Non-coding RNA: Small (ncRNA-sRNA)
             Description The sRNA14, one of Pseudomonas pseudoalcaligenes CECT5344 sRNA candidates, showed a high representation among enterobacteria. [1]
Host Immune Factors (HIFs)
          Immunoglobulin G
             HIF ID HIFM0270 HIF Info       Class Immunoglobulin (Ig)
             Description The abundance of Pseudomonas oleovorans is associated with IgG response. [2]
          Immunoglobulin A
             HIF ID HIFM0272 HIF Info       Class Immunoglobulin (Ig)
             Description The abundance of Pseudomonas oleovorans is associated with IgA immune responses. [2]
Environmental Factor(s)
             Disbiome ID
      1457
             gutMDisorder ID
      gm0550
References
1 Putative small RNAs controlling detoxification of industrial cyanide-containing wastewaters by Pseudomonas pseudoalcaligenes CECT5344. PLoS One. 2019 Feb 8;14(2):e0212032. doi: 10.1371/journal.pone.0212032. eCollection 2019.
2 Serum antibodies to Pseudomonas pseudoalcaligenes in metal workers exposed to infected metal-working fluids. Int Arch Allergy Appl Immunol. 1989;88(3):304-11. doi: 10.1159/000234816.

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