Details of Host Genetic Factor (HGF) Regulating Microbe Species (MIC)

General Information of HGF (ID: HGF2342)
HGF Name SMARCAD1
HGF Synonym(s) HRZ, ETL1, HEL1, ADERM, BASNS, SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
Source Homo sapiens
HGF Classification Copy Number Variation: Gene Deletion (CNV-GDe)
Gene Location chr4
Gene Start Site 94207611 Gene End Site 94291292
Strand Forward (+)
External Links
Ensembl ID
ENSG00000163104
Microbe Species (MIC) Regulated by This HGF
         Akkermansia muciniphila (verrucomicrobia) MIC00056
             Description The deletion of SMARCAD1 was significantly associated with a decrease of Akkermansia muciniphila (p-value<0.05). [1]
         Bacteroides acidifaciens (CFB bacteria) MIC00145
             Description The deletion of SMARCAD1 was significantly associated with a decrease of Bacteroides acidifaciens (p-value<0.05). [1]
         Bacteroides caccae (CFB bacteria) MIC00148
             Description The deletion of SMARCAD1 was significantly associated with a decrease of Bacteroides caccae (p-value<0.05). [1]
         Bacteroides eggerthii (CFB bacteria) MIC00155
             Description The deletion of SMARCAD1 was significantly associated with a decrease of Bacteroides eggerthii (p-value<0.05). [1]
         Bacteroides uniformis (CFB bacteria) MIC00184
             Description The deletion of SMARCAD1 was significantly associated with a decrease of Bacteroides uniformis (p-value<0.05). [1]
         Bifidobacterium pseudolongum (actinobacteria) MIC00220
             Description The deletion of SMARCAD1 was significantly associated with a decrease of Bifidobacterium pseudolongum (p-value<0.05). [1]
         Escherichia coli (enterobacteria) MIC00516
             Description The deletion of SMARCAD1 was significantly associated with a decrease of Escherichia coli (p-value<0.05). [1]
         Faecalibacterium prausnitzii (firmicutes) MIC00590
             Description The deletion of SMARCAD1 was significantly associated with a decrease of Faecalibacterium prausnitzii (p-value<0.05). [1]
         Lactobacillus reuteri (firmicutes) MIC00731
             Description The deletion of SMARCAD1 was significantly associated with a decrease of Lactobacillus reuterii (p-value<0.05). [1]
         Mucispirillum schaedleri (bacteria) MIC01921
             Description The deletion of SMARCAD1 was significantly associated with a decrease of Mucispirillum schaedleri (p-value<0.05). [1]
         Prevotella copri (CFB bacteria) MIC01010
             Description The deletion of SMARCAD1 was significantly associated with a decrease of Prevotella copri (p-value<0.05). [1]
         Ruminococcus gnavus (firmicutes) MIC01137
             Description The deletion of SMARCAD1 was significantly associated with a decrease of Ruminococcaceae gnavus (p-value<0.05). [1]
         Ruminococcus torques (firmicutes) MIC01142
             Description The deletion of SMARCAD1 was significantly associated with a decrease of Ruminococcus torgues (p-value<0.05). [1]
References
1 Smarcad1 mediates microbiota-induced inflammation in mouse and coordinates gene expression in the intestinal epithelium.Genome Biol. 2020 Mar 11;21(1):64. doi: 10.1186/s13059-020-01976-7.

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